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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78509232, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLLSNNSK RRAYRWQQGF SVLALSSIST FCTMAAPTIT TQATALQAVA AKTMPENPNV  60
   61 AEGEILPAHH NGEQANKYKP VIYQIFTRLY GNKNTTNKPW GTISENGVGK FNDIDDTALK 120
  121 SIKDLGVTHV WYTGVPHHAL IGDYSAIGVS NDDPDVVKGR AGSPYAVKDY YNVNPDFAVD 180
  181 PAKRLQEFQA LIERTHKQGL KVIIDIVPNH VARNYHSITK PEGVRDFGED DNQTLEYAKH 240
  241 NNFYYVTDKK QSSGFQVPDL PDSLKPLGGE SHPLSDGQFK EIPAKWTGNG SRLAKPDMND 300
  301 WYETVKINYG VRPDGSHDFP TLPPRYATLC AEQHYAFWQQ HSHELPNSWI KFNQITQYWL 360
  361 AMGVDGFRYD MAEMVPVEFW SYLNSHIKHS HPEAFILAEV YNPTLYRDYI QLGKMDYLYD 420
  421 KVDLYDTLKA IMAGQKSTAQ IAADQAKVQD IDSHMLHFLE NHDEQRIANA AFLGALNGNS 480
  481 STDGVDPRYA LPAMVVSATL STSPTLLYFG QEVGEAATQN LGFGHASRTS IFDYAGVPAH 540
  541 QRWMNQGKFD GGQSTAAEVA LRTYYQKLLN LSTGKNAPAL LGKYHSLDAA NRSAVSAAKA 600
  601 SNKANNKTNN GSATGYDDST FAFVRFEAHT ANSKGQKLII VSNFSQTQAK SLSLKLPKSL 660
  661 IAQWQLTDAS YPLKDLLEDH TAQLIVERGE GQVQLQLAPL SSAIFELVH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle