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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114046622, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRDFLKGL ASTSFVALGG SSVLAPLNAL ASTGLNEDEW LTTGSHFGAF KIKRKNGVIA  60
   61 EVKAFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTQQRG DFRFVRVTWD 120
  121 KALKLFKHSL DEVQTKYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NYVKKIGDYS 180
  181 TGAGQTILPY VLGSTEVYAQ GTSWPLILEN SNTIVLWSND PYKNLQVGWN AETHEAFAYL 240
  241 AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MITQKLYDDK 300
  301 FIQGYSLGFE EFVPYVMGTK DGIAKTPEWA APICGVEPHI IRDLAKTLVK GRTQIMMGWC 360
  361 IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPATNAAAP GAFPRNLDEN 420
  421 QKPLFDSTDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ 480
  481 DRNRMKQAFH KLECVVTIDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK 540
  541 MVEPLFESLS DFEIFTRFAA LMGKEKEYTR NMSEMEWIET LYNECKAANA GKYEMPDFAT 600
  601 FWKQGYVHFG DGELWTRHAD FRNDPEINPL GTPSGLIEIF SRKIEQFGYD DCQGHPIWME 660
  661 KAERSHGGPG SDKYPVWLQS CHPDKRLHSQ MCESKEYRET YTVNGREPIY ISPVDAKARG 720
  721 IKDGDIVRVF NDRGQLLAGA VVSDRFPKGV VRIHEGAWYG PVGKDGSVEG GAEIGALCSY 780
  781 GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKVPKVSS FDGPIEVEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle