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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114047597, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSNPLTHAR HINSPMRNSR HWAASLFTPS LLALSIGSLL CTSAAAQTLN LSSPDKQIVL  60
   61 SLSDDTGRPE YQVHFHGKSI IEPSRLGLVF ASLGELGQGL RIKSSHTASA DEKWQQPWGE 120
  121 QEWIKDQHNQ LSVVLTDGKI DLNLEFKAFD DGIGFRYHLA AQHALPTNTP LAITDELTEF 180
  181 NVGQSDKATA WWIPSRGWNR YEYLYRTSAL NQVDRAHTPF TFKLVDGPHL SIHEAALVDF 240
  241 ASMTLDQQRD GKLKADLTTW SDGIRVKTQA GFYTPWRTIQ IADKATGLLN SHLILNLNEP 300
  301 NKLGDVSWVK PGKYVGIWWG MHLNENTWGS GPTHGATTSE TERYMDFAAK YQFDGVLVEG 360
  361 WNQGWDGDWF HNGDQFSFIK AYDDFDLPAI TAYGAKKGVR LIGHHETAGS VTHYRNQMDD 420
  421 AFALYEKHGV TQVKTGYVAD GGQIKRIDEN GITRHEWHDG QFMVGEYLHS VTEAAKHHIS 480
  481 INSHEPIKDT GLRRTYPNWL AREGARGQEY NAWGSPPNNP EHTAMLPFTR MLAGPMDFTP 540
  541 GIFDLAPKGL DAENRVQTTL MKQLALYVVL YSPIQMAADL PRNYQKHLDA FQFIRDVPTD 600
  601 WYQSIALAGE VGDYVVFARQ AKDQQDWYLG ALTDENARQV KVKLDFLDPN KRYQAQIYRD 660
  661 GAKADWKTNP YDYVIETKEV SAKDSLTLQL ASSGGTAIRF KAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle