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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114047388, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPFTQISA IAVTLAGLIS TPLSALAQPV SAQAYKGSQA QALLFNNDNH AVIPAVDWLW  60
   61 VSEKQGLMLQ SMPSADKTSL PAANTLVKGE FELLAFSDPY ALTLDRRADR IRPIMIKQIE 120
  121 GKVATNILPL LPMTSFEINW ICIQPRPQDG NIYAWFGGED GYSEQWLLGD AGHFMPKKLR 180
  181 TQAIPVNSTS CAIDGDKLLV SEPEAGVWQF DASPFADNSA KLVLAALNND IAGMQVIDGK 240
  241 LLLSDKKGAL TLDQQPMANY HLGKVQGLSA YLSGSKNNDS NDNHTALQLS LYDDKTDQYW 300
  301 FTEASLSAVN SETNTKDAQK EIVEIPAWVE SASSDRPGDT MDDPAIWVHP TQPEKSLVLG 360
  361 TNKRWGLLSF NMRGEQVQAL PSGRINNVDL RQQVLLGGKK RDIAVATLRD NDSLAFYEID 420
  421 AEGKLNEYPN QATNMQDIYG MCLYQDADTL YVFANEKSGR IAQYRVDWQA NGPSIKLVRD 480
  481 IHTPSQVEGC VVDEAQHALF IGEEDKGIWR FNAKANGGTQ GELIIKAEGD LVPDVEGISL 540
  541 YQGATIQGKK QDLLVVSSQG DNSYLLYQTQ PPYAQLGKFR IGMNLNGMEN GRETSIDGSS 600
  601 ETDGLAVTHL SVGTGAWQQG MLVVQDGHNH LPDNNQSFKW LPWRSIVEKL SLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle