YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78690334, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNPRSLLNS LRRKTISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY  60
   61 FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNAVLLRENS EAFLAEVVPH EISHLLCFQL 120
  121 FGKTKPHGRE WQSIMLTLFK VSPNTTHSFD TQSVKGKDFE YRCACGPVRL SIRRHNKVLR 180
  181 GETRYLCKRC HTHLTFTEAA E

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	201	0.99