YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78690333, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNVKIALRS RQALLCLFSW LAVSASVHAS PSHPNSFSQA KVLSQSLYQG SRQGTLPAVS  60
   61 FYCGCDIQIK GKSWKPDLNS CGYQVRKQET RANRIEWEHI VPAWEFGHQL QCWQKGGRKN 120
  121 CADSSQEFNK MEADMHNLVP AIGEVNGDRS NFRFSQWNGK ADQYGQCAMV IDFKNRQAQP 180
  181 PVNARGKIAR TYLYMQQTYG LKIASQQLKL FKAWDKSYPV DTIECKRDNA IAQIQGNHNP 240
  241 FVQNACNAPP LRQQLAE

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	257	0.99