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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78510637, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTLYFEGP IDKLNWHVVK LLWPYLLEYK GRVALAMSCL IVAKLASVGL PFILKDLVDT  60
   61 LDANKTAQAL SVPIGLVLAY GAVRLLTVIT GEIRDTLFGR VTERAIRRLG LAVFDHLHRL 120
  121 DLDFHLERRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIAMVIGIFF FNYGIAFAAI 180
  181 TFTSVIAYIW FSVVATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESDRY 240
  241 DQALDQWEVA KRKNRLSLFA LNGGQALIIA LAMTAMMALA AYKVTNNEMT LGDFVLINAF 300
  301 MMQLFMPLNF LGFVYREIRG ALANIERMFS LLDKHPRIVD KPDALDFEPK RGELSFEHVS 360
  361 FSYDDRPILR NVSFKVAAGE KVAVVGDSGA GKSTLIKLLF RFYDVEQGRI LIDGQDIRHL 420
  421 TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPDATDEEVR HAIKLAHLEH FIASLSQGWD 480
  481 TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT 540
  541 SLVVAHRLST IVDADQIVVL SQGEIVEQGN HQSLLTQDGL YAKLWRIQNE QQQLSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle