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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113890838, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIKAFAHYL KVNLLVALAY FAVGKMGLLI ALPPGYSAAI WPAAGIAIAS CLIWNKYSPW  60
   61 LGILVGSWLI NINIGGENHL GWLPLVIASA SSLQAYVSAN AIRRIDPLVT LDRPNTVIKS 120
  121 CLSLALTCMI ATTFGNAALV AHGAIPIKDA LGSTVNWWLG DLLGAVIFIP LIMLLFDQRS 180
  181 IWRSRRIHTG LPLLVGFSFC VVVYYYSDMN QRQQLQDKFQ IQSNAIINSV ESFQGANLQQ 240
  241 VIALASLFDN SEQVSEDEFI QFGKRNQLQL DGFRAWAWSP LIAATDKDNF EAATRNEIGE 300
  301 NYRIRYLAGG QPNPDGWLVP VKFVQPMNTS RAALGLDLNG EPTRAAAIAK VRATLSPVMT 360
  361 GKIQLAEDPN GPGGTLILAP VFDRLGIVEG FCSAVIDLQS IINEVEQVKG LHWRLTDMSA 420
  421 GGALLYTNSQ KIFPEFMGSI HSDRMGQYYQ ANLMLADRHW HIVIYESYSA LMGDTFSLSL 480
  481 LLLLLAFITC AVVGGMTLVS SGERYRIAEK VAEKTMALSK EIARSQTFQA TLVESEQRYR 540
  541 TLFDKAPVGH ALKRLEDGQF VAINQAFMDI TGYTLEELQA LDPWELTPIR YRVSETEQLE 600
  601 RLKQTRRYGP YQKHYRHKDG QMVAVRLNGS LVTAANGEQL ILFIVEDITE QERTVARVNL 660
  661 LAQVFQQSGE GIAIMDAHDI IVDVNSAFTQ ITGYSRDEII GKNCRSLEAE RTDRSIDARV 720
  721 RAALDQTGFW QGEVWDRHKD GYDFPKWLMM SVVRDETGSV SHYIGSFTDI SERKVNEERI 780
  781 HFLAHHDSLT LLPNRLSLQS RLETVFQEAF VSQTQIAVMF IDMDHFKNIN DTLGHHVGDM 840
  841 LLLEVARRLK NIVSSDDIVA RLGGDEFVVV LSDTDHDEVA KVAEALRSGL NQTYIIDNKP 900
  901 LHSSPSIGIS LFPTDGDSVE ALMKNADMAM YRAKAAGRNN YQFFTAAMNT LVTERQQIET 960
  961 GLRQAIARDE LRLHYQPQID INTGQMVGVE ALIRWQHPEL GLVAPDRFIP IAEEIDMIIP1020
 1021 IGQWVLEQAL AQLAEWREKG AKGLRMAVNL SAHQLRKDTI VADIINVLTK HKLPKGALEL1080
 1081 EITESVAMQY PEQNAKLLAE LRQHGIELAI DDFGTGYSSL SYLKLLPLDR LKLDRSFVKD1140
 1141 IESDPNDAAI SAATISMAHE LGLTVVAEGV ENEAQLVLLS SMGCDLVQGY YFSKPLAAED1200
 1201 CLRFIERNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle