YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114049407, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAMHSSPLC LKSIAIISLG LWLAWGSVAA AFADEAKSKP RIVARYSESG IVSNTGQEKV  60
   61 KVYQYLQANG VTAFTDKAPT TNEYQILLYD CFACRPDSKI DWNGIRLFTR NYDSLISRAA 120
  121 HKHQLDPALI RAVIHAESAF NARALSRTGA MGLMQLMPET AKEMGVTNAF LPEENILGGS 180
  181 KYLAQMLKQF NGDIALACAA YNAGPTTVTQ YNGIPPYPET QAYVERVQIL LKRYRSAKV

Type	Start	End	Confidence
Signal Peptide	1	33	0.95
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	239	0.99