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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113889506, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG  60
   61 IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELSIPMVV 120
  121 VLNKIDAAIK RGIRVDLKKM SQELGCPVIG VCSRDPADVA KVQAQVLDLL QGRVSEAPLL 180
  181 LDYDEQIEAG VQLLCSKDPN LSRGRALAML GNGSGCGSCK NAELQDEVST CTEQIAQQGH 240
  241 DIEVMVATTR FNFVERVFQG SVKTDGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI 300
  301 NIGSAFIDFF DVFVGALLVD HFGAFLGNMG APAWLVTILA GGVGQGIQTV STFIPVIAAL 360
  361 FLGLSILESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER 420
  421 IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRNTLLPG 480
  481 TSSAVVMELP SYEMPKLKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGTFGH 540
  541 EDSQASLLSV ASQKVTPIFA PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYTNAAPED 600
  601 GELTPLADSF NEALATIPAN LFGLDLEDPL KLSVGDVSST DVAAEAQGVA TSTFSALQSG 660
  661 FTTTVAAFSY LLFILLYTPC VAAMGALVHE FGSRWATFAA TWTFSLAYGS ATIAYQAATF 720
  721 SAHPVQSSLW IGFFLVALVV FYLWLKRKGR RTQQIIPGIR IITE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle