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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78689412, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESQVIQPGS APQSMLKGGR SSRRAFKDKA AQIGVTIGGT MVFVALLLIF FYLLYVIKPI  60
   61 FDSADVTPVK SVSYQHAEVA TLMVGADEQN EVMYRVAADG QVDFYTVADG SLLSSFTPPL 120
  121 PAGVSVTSAA IAAPSEQRFA LGLSNGQALI VGIEFGLSYP NNKRLITPKL RYSAGEAPIT 180
  181 IDESGSAIHH LAFSYSNDKI SFAYQDDNGA WRLSRLEGQE NMMTEEVEWT TTSALLPDAP 240
  241 KKVAHQLMTP DQRQLMLQMG NKVFIYNIRD IESLDLMQVI DAEKEKSKVN NIALLAGASS 300
  301 ILVSYDTGVV TQYFQVNGPK GRLYKEIREF TDLPPVTSIA SEFYRKSFAV VSPEGELSLL 360
  361 YTTSERELFD EKFDLKNPGV MGFSPRSNGL VVEANKQLNI FHVENSHPEV SWSALWNKVW 420
  421 YEGYPEPKFV WQSTSGSDDF EAKLSLMPLA YGTMKAAFYA MLFAVPLAIA GAIYTAYFMS 480
  481 PKVRGIVKPT IEIMEALPTV ILGFLAGLWL APLIEEHLPG ILILLILLPT AILVSAYSWS 540
  541 KLPGQWKQRL PEVYQELMLI PVICFVGWFS FAISPMIEVA LFDGNTRQFI TNELGITFDQ 600
  601 RNALVVGIAM GFAVIPTIFS IAEDAIFSVP RHLSNGSLAL GATPWQTLTR VVLLTASPGI 660
  661 FSAVMMGLGR AVGETMIVLM ATGNTAIMEW SVFEGMRTLA ANIAVEMPES AIGSSHYRVL 720
  721 FLAAFVLFVF TFFFNTIAEV VRQRLRDRYS SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle