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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688964, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRCLAFLNL AQLNKAHYMR WVASNLLLLF YFFSLPSAYA AIDCNSVFPG PIQSFSSSGE  60
   61 LYMQSNALVE NYNALDVCFK KVKNFHEMNA SACGIGKCQI TGTPSLARAA PTFVSSSTSA 120
  121 SNVVANWTTP VVELGTTVGY GQRFDSSRWD IGQLTINTGG NVTVSDTYST YVIKDLTFYN 180
  181 SGTMTLKAGK TYIIDGDLNL NSGILNIVGT GDTKLYIKGN FTIALSSVFN APTSLDVYVG 240
  241 QKLELQSNAQ IQGSYYVADD AVLQNSAVLI GRLSAKNVTL QSSSKVIYDA GTPPLQCFND 300
  301 NFSQSALSND WVVSRSSGSF TPAIVSGRMR LTEAKSNQST ASTYQRLFPA ANNLVEIQFE 360
  361 HYAYGGSGAD GIAVVLSDAA ITPQPGAFGG PLGYGFKPGI NGFAGGWLGV GIDEFGNFSG 420
  421 EGGSINLSGQ RRQSVAVRGS GSGTSGYRYL RGTCNNGTTN TSGNCLSPTV DGNNVSPAHR 480
  481 YKITIDSQVS GQSMVKIERN TGSGFVTLIP AFNAIDQQGQ AATPSDFLLS LTGSTGGSNN 540
  541 NHEIDNVQIC ALRSNPIGAQ IDHFEFDHTG QGLTCNPETV TIRACANASC SQLFTDPLTA 600
  601 TLLPESTSEG IWIGGNQVSF NNGSTQLQLR RNTPGVVTLG VKGSNPTTKP LSKTLCRIGN 660
  661 GGLSENNCSL TFADSGFVFD VPDKRANRPE QVLVKAVKKS DVTQQCVPSF QSQTKTLNFW 720
  721 SSYHTPSAPI SPKAVTINNT AIGTSSASPT TLNLKFDTNG QASISVNYPD AGKLQLDAQY 780
  781 IGSGNEQGLV MTGSDQFVSV PAGLCVKPVD ASASCPSADM SCNAYRKAGQ NFGMTVQAMA 840
  841 WEDDRDTDFC SGNLPTPNFS DQAMTLTSKV FAPNIASGGH DGALGVASYS HAIQANNLNS 900
  901 ITNQTISEVG VFQIAAQASP NYLGVASSLN IPIGYSANIG RFVPDRFLVG DISVVPACGS 960
  961 FSYMDQLFPM SMSLKALNIG GAVTQNYFPP FSLATAKLVG ENNNNGIDLQ SRLSALPVNA1020
 1021 ASWVQGVATV DGTYRAYLNR VTPNVTTNLY QDGPFELLDI GVQLMDNDPR PNGLFSYVAS1080
 1081 PDMNAATTGN CTNCNAKKIT SQILRHGRVV MDNTYGPETE ILRMPTRAEY WNGTNWVLNG1140
 1141 DDSCTIATYS LESQVDNAGL GYNFDPDLTT GQSINRSGAT SAFQAGQFDL LWRALTSSGN1200
 1201 LYRGQVTAPL NVPSWLEWYW DWNGLSPTSL SDPRASAFFG RYRGHDRIIY WREVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle