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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688952, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAIKYITPL LSLCLMACQT TDRPQPVASK EALATSMQTA SQPTPPPPAT MPDAVQRELN  60
   61 ANAMMGGLTP PMETERRIDV SAHDVDARVF FPSLVQGTPF SVAVHPDVQG TISLSLKGVT 120
  121 LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSLT SVSSGRISDN 180
  181 NNSNNNNSNN NNSNNGNFGN NSNNNNSNNG NYGNNNSSDS TNGTFIRSRT KTDFWGELKE 240
  241 TLSAIIGDTG GGRQVVVTPQ AGLVTIRAYP NELRQVRAFL NSAESHLQRQ VILEAKILEV 300
  301 TLSDGYQQGI QWDNVLGHVG NTNINFGTSA GAGLSDKITA SLGGVTSLSI KGSDFNTMIS 360
  361 LLDTQGDVDV LSSPRVTASN NQKAVIKVGT DEYFVTDVSS TTVAGTTPVT TPQVELTPFF 420
  421 SGIALDVTPQ IDKDGNVLLH VHPSVIDVKE QTKDIKVSSE SLELPLAQSE IRESDTVIRA 480
  481 ASGDVVVIGG LMKSENTEVV SQVPLLGDIP LVGELFKNRS KQKKKTELII MLKPTVVGND 540
  541 TWKNELERSK TLLDRWYPEN K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle