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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688853, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFNKLMIAM GMACGVMLTG CNDSEDSTPP TEPETQLQTF APNGLLKANI RRTTYGVPHI  60
   61 QADNLESLGF GSGYAQAQDN LCVLADGFIK ANSQRSMYFG PHASIDFTTG QPTAEDNGNL 120
  121 ISDFAYKALK IREQAEAKWP QFSERSRALI QGFTAGYNQY LADVEAGKQT AEPFCGGQPW 180
  181 VKPIVPEDVV TYLFSIALLP GAANFLDLIF YANPGDGQEY MPRIVGPAPS QEQTAFVSDM 240
  241 QSKLLARAAR ITTPETNPRD LGSNGWGLGK DKTENGRGMV LGNPHFPHTG NLRFWQSHIT 300
  301 IPGQLDMMGG SLVGMPGPIN IGFNKDLAWT HTFSTAEHFV MYNLELVSGD RLQYLFDGQP 360
  361 MPINKETVSI LVNAGPAGML VAEKDIYTTA KGPMVEAPPS LAPFGWDDGS AFMIQDANMA 420
  421 TMDPVDHWLA MNLATNKDEF QQAFKDYDGV IFNNTMYADK EGNAFYIDDS TVPGLSEAAV 480
  481 VVLKTSPDIK AAKEQAGFTI LPGNTSLFSF NGPTPYERAP KLERSDFVQN SNDSFWSTNL 540
  541 NEPLTYFSPM YGPEAGQLSL RTRMGLTLMQ DAAGSDGKFN LEELEAAVLS NRSYLAELVL 600
  601 PDLIAQCEAQ GSTPVVVSAS LSKELTSACA ALKAWNGKQD NDSKGGALLR EFAHQFSQKT 660
  661 MLTKGFDPAN AATTPNTLTT DGSALVALAH AALNLEAAGF ALDAPLGDVQ FVEKSLPDGT 720
  721 ASGARLPWPG SHNAEGGFNV FSTSLSGDDT LIPQHKYAPL MDVVTGKAMA SGMTAKGYQV 780
  781 RYGSSWMMAV SFTDEGPVAR GILTYSESSN ILSPSFTDQS NLYSSSKSFR PLLFKEADIA 840
  841 PAVISTTELT LQKAQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle