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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688636, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VLSLLTAWMF FDRQKTQQME QREEQVERHV  60
   61 LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKERLPQYG KFNESGQYFT LEPNYAKGGK 120
  121 PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRMMSYF 180
  181 PWTNGDQRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYVD STGKGLLTTL GVPVYLDDEF 240
  241 MGSINLDMTL ASLARQIRVY FKMPGTVILL DQQNNILSHS DFDGSDINRV YHISQRIPSE 300
  301 LHSLPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQN EDDLFQDSVE KLQLTFILVV 360
  361 IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITPGWEPW FLLVSRIFEE 420
  421 NKQYTHHLAE QNKRLDKLVA RRTERLKDAT ERREREYALL RSLLDSIPEA IVFKDKEGNY 480
  481 LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDE QILKDRTPLR YQEKVELAGK 540
  541 PVLLDTLKLP FYNRRGELQG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY 600
  601 LDSEHIICNP SYYSMLGYKP NEFPALVSAI DQLTHPDDRI RVEEYRNQYL QNPVDAYEIE 660
  661 FRILGKNGSY HWVLSRGRVV EFTADGQPKR MVGTHKDITR HKSNEVALLE AKQDAELANL 720
  721 YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTAQQKDYL EKAGFSAQSL LRIINDILDF 780
  781 SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ 840
  841 VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA 900
  901 DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV 960
  961 PEKLNNLRTL VVDDNPTALQ IYSALMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM1020
 1021 PEMDGGDVIS AIDTMVAEGR IAKRPIIIMM TAYAAEPLQH EVDSANVFAV LQKPFKASSL1080
 1081 FDEIIAAFAD EPRLNVVQPI DEVPVEEGEH TGLVLLVEDN FINQQVATEL LKSAGYEVVV1140
 1141 AGNGQIALDI IDSRPFDAVL MDIQMPVMDG LTAARALRER FSADVLPIIA MTAHAMSGDR1200
 1201 EKSLAAGMNA HITKPIVLTE LFETLSHWIK HKNNHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle