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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688603, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.12
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMDSFPDSF SPSKNVYASV ISSSWLMLLA AVFFMGISWY VLEEYLRDRG EERFNNNVQD  60
   61 LIAAVSSRMT AYEQVLRGGV GLFLASDGVT RHEWQLYVSN ARLTEYYPGV QGLGFAQLLT 120
  121 TANLDSFTQE VQQEGFSDYR VTPTGEREFY CAIKYLEPFD WRNQRAFGFD MCSEPTRRTA 180
  181 ILHAIATGLP TASGKVTLVQ ETPDDAQAGI LMYVPLYHGQ PITEEERKQQ AIGVVYAPFR 240
  241 MNDLMQGIMG KRFSGLKLAI YDGIEANKDT LMFTSHTALP SADDVFYQSQ LETMEGQVWR 300
  301 LEVSSESRFI SSSEQTQSIW LQIIGSAFIL VLFYSVLTMA RNRYQESRLT AELIANEKRF 360
  361 RLVIEASPSA LFMVDRTGII TLVNTHAERL FGYARDELLG RSINMLLPEA LRDVHQQHMG 420
  421 NYLVQPIAKN MSLRDDLFGC CKDGTRLAIE VGLTPIHFSN GVSILATINN VSERKRIEAQ 480
  481 RIEHTAELER INKELDQFAY IASHDLKSPL RGIEQLTNWL SEELAENTDE NIQKYLGLIQ 540
  541 SRIQRMVLLL DGLLMFSRIG RVDAERVEVD SRQLIEDMFA LVAPPQGFSL ALEGNFPRFK 600
  601 TVKTLLELVI RNLISNAIKH HDKGEGVIKV ICETSNHHYL FSVIDDGPGI SSRFHGKVFQ 660
  661 MFQTLRPRDE VEGSGLGLSL VKKTVESLGG KIQLESEGRG CCFRFSWPMH IVNKEGI

YRC Informatics Platform - Version 3.0
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