YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MINC_SHESA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPSLELKG ASFTLSVLHI NSSDLNAVMA ELDSKLAQAP QFFLGAPLVV NLSAIQDNDF  60
   61 NLHGLKELLL SRQLVIVGIT GATTALSNQA KTLGLAIVKA GKQSVTPPPA PRQTKVLKQN 120
  121 IRSGQQVYAK NGDLIIFGAV GNGAEVIADG SIHIYGALRG KAMAGAAGDS SAVIIAHSLE 180
  181 AELVSIAGQY WLAENLQQHS SDKSGCIRLN GESLIVESLP L

Type	Start	End	Confidence
Signal Peptide	1	30	0.65
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	221	0.98