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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78504255, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLLSNNSK RGTYRWHQGL TLLALSSIST FNAMAAQAIT TQATALQAVA AKTMAANPNV  60
   61 GEGEMLPAHH HGEQANKFKP VVYQIFTRLY GNKNTTNKPW GTISENGVGK FNDIDDTALK 120
  121 SIKDLGVTHV WYTGVPHHAL IGDYSAIGVS HDDPDVVKGR AGSPYAVKDY YNVNPDLAVD 180
  181 PAKRLQEFQA LIERTHKQGL KVIIDIVPNH VARNYHSITK PEGVHDFGED DNQTLEYAKH 240
  241 NNFYYVIDKK QSSGFQVPDL PESLKPLGGE SHPLSDGQFK EIPAKWTGNG SRLAKPDMND 300
  301 WYETVKINYG VRPDGSHDFP ALPPGYATLG AEQHYAFWQQ HSHELPNSWI KFNQIAQYWL 360
  361 AMGVDGFRYD MAEMVPVEFW SYLNSHIKHS HHEAFILAEV YNPALYRDYI QLGKMDYLYD 420
  421 KVDLYDTLKA IMAGQKSTAQ IAADQAKVHD IDTHMLHFLE NHDEQRIANA AFLGSLSGNA 480
  481 STDAVDPRYA LPAMVVSATL STSPTLIYFG QEVGEAATQN LGFGHASRTS IFDYAGVPAH 540
  541 QRWMNQGKFD GGQSTTAEVA LRTYYQKLLN LSTGKNAPAL LGQYDSLDAA NRSAVSAAKA 600
  601 SNKANNKTNN GSATGYDDST FAFVRFEANT ANNKGQKLII VSNFSQTQAK LFSLKLPQSL 660
  661 IAQWRLTDAT YPLKDLLEDH EAQLVVEQGE GQVKLQLAPL STAIFELAH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle