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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78504330, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKLLAVM ITAALGVSAC GSDDEQIVQA DLRVLETTDL HTNIMDFNYY SGKEDPTIGL  60
   61 ARTASLIHAA RKEAKNSVLV DNGDLLQGSP MGDYMAKVGL QMGDVHPAYK AMNLLDYEVG 120
  121 NIGNHEFNYG LDFLNKSLHG AEFPYINANV YCTDDNGCWN DVKKGEHLFT PYIIKEKQIV 180
  181 DSEGNNQTIK IGYIGFVPPQ ILLWDKQNLT GKVTVEDIVA TAKKYVPEMK AKGADLIIAI 240
  241 PHSGIGSTEN PGDPMAENAT YALTYVDGIN AILFGHSHSI FPDAKYADLP NTDVTKGLLN 300
  301 GVPAVMPGRW GDNLGVVDFK LERKDGKWSV LSATTKARPI YDGATKTPLV EADAAIHDAV 360
  361 AAEHQGTLAF VDEPIGVAAA DMYSFLTLVQ DDPTVQIVSD AQIANVKAKL PEALKDLPVL 420
  421 SASAPFKAGG RHGTTSDADQ YVQVDKGALT FKNAADLYLY PNTMVAVKAT GAELKDWLEC 480
  481 SVNQFNQIDP TKTTPQELIN WDGHPTYNFD VLDGLTYKID VTQPSKFDRD CAVVNANANR 540
  541 IVDLSYTDTN GKVFTGEEFA AKEFIVASNN YRAFGGKFAG TGSDHVVLEL PDTNREALAA 600
  601 YITAQSKFNE TTGKYEGMVN PSADYNWDFK TISTNVALDI RFQTQDSDKA AAFIEANKQR 660
  661 EMTKISKDEL GFAVYRINLS QDKAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle