YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78687871, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSRALICNF CIKGHPKELL VTMFKTLALK TPVLKTSVLK HSVSWLVLVG LAFFISACSK  60
   61 QDEVISLAGS TMGTTYHIKV VPNEQMPTAQ LLQAEIDLAL ELVNNQMSTY RPNSELSRFN 120
  121 QLPLEQSVEV SPDTIKVVKE GMRLYNVTDK ALDITLGPLV NLWGFGPDKR PTKVPTQADI 180
  181 DAAKAKTGIS ELSIEGNRLS KHNAHLYVDL SSIAKGFGVD KVASILDKYH ASGYLVEIGG 240
  241 ELSIKGTKGD GSSWRVAIEK PTDDGMAVQQ VIEPGTMAMA TSGDYRNYYE EEGQRFTHII 300
  301 DPRTGLPINH KLASVTVLHK KCMTADGFAT AMMVLGTEAS LELAKKEHLA IMLIEKQGEG 360
  361 FKVYYSDAFK PFLK

Type	Start	End	Confidence
Signal Peptide	1	57	0.50
N-region	1	48
H-region	49	54
C-region	55	57
Cleavage Site	57	58
Non-Cytoplasmic	58	374	0.99