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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78687521, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKRPLIEPQ APLTQWQKSL PFKLSLIQLL IASILIFSTA WVILNIQTQQ ISEQQTLLNQ  60
   61 NHGQIIIAKL QEMTSQVENQ VNAISQIAML YRYEPEQLSK SIPVLLSIEN QKAIISGGGI 120
  121 WPEPGAFDRQ KFRDSLFWSH NIHGELVAIN SYNDDSFPSY HTEEWYRPTR YFPVGKIFWS 180
  181 KSYVDPTTHE PMVTASGAMW MDHQFIGAAT TDISLEKLSQ LLRNTMLDVS GYVIALDHQN 240
  241 QILASPNSDN WPQSSQNPPH TLQTFDELAK TEAAFSPIAS ALHLADRSFI EQAVAERVFT 300
  301 QEQMDNLTRL SGDNEREMLS AIVNDNAKSQ FSSPRRIASV SLTMDPILKG PSLVSVFLMP 360
  361 HTYWKILVVT PIAPLQDTAK KLIEKVGLSL VLIQMLGLIL LFLLQHRLII APIMEMVQAL 420
  421 KRNDSASIEL KAKERHDEVG LLAKSFLSRT QQLEVAMASL DASNLALEQQ LLTQQHFQQE 480
  481 LSQRKEQLRS LLDFSSTIIY IKDLNGRYTL VNNKYCEVLG IERRKIIGAT DFELFPNSLA 540
  541 QQYQQNDQRV THSHEALHFE EVIPSLRGEL IYQISKFDIR DDEDNSLGVG AIGFNVDLRK 600
  601 RQEKEQEKLL QAQLSLLKEQ QHKTQLSQQE NSQLREQLAA IQDEINQQIQ LNLSKQQSQK 660
  661 LMQNFLADVM SQMMLEQDKL LAQICQVRSK EDDSHQTQVV QLMSQQAARL RHISQLFTDQ 720
  721 HSEIRPLHLA QFINQLLSLL QPQLLKTQVK VKLECDEQLV IDGNAWQYLQ FFYRLINNTL 780
  781 HHAFKEHNQD RTLVLTLEKK DGELYMQLKD NGVGIPITHL EQLRQEMQQN QCIGTLTCIN 840
  841 LWIKEELHGE LKVESELNRG TLIECHWPLS AI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle