YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117614460, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCILSLMGL NLSYADEDIT LNEFKVGVLA NHGVLQAKQR WQPMMDYLSE KVPNSRFEVV  60
   61 PVDFNGMRSQ LLSHDLQFIV TNPGQYLHLS NNFPLSWLAT MKSRKHQGST FTIGATIIVR 120
  121 ADSPIRSLQD LRGKNVVASD PQALGGYQAA MGLLHKMGYL PEQFFGDVRF LGFPLEPLIY 180
  181 QVRDGNADAA IAPFCTLEEM IETGLINQVD YRVIHPTNPP GYDCEVSTQL YPNWSFAAAD 240
  241 TVSPRITMQI TRALFDLPAD HAAAITADTL GWTAPVSQLK VIELFKELQL QGASPPLYQT 300
  301 VYKWMEKNKE WGGVLLLIFI VSTIYHLWLE YKFRQKSEFL VSTERQLKDK ALQLERLQSA 360
  361 AILGEIGAGL AHELNQPIAA ITQYSEGAMI QLERLGQDNP ELYDILGKIN AQSIRAGAVV 420
  421 HRIRGLLKRR QAKAESLNVT LVVKEALALL RRELDRAEVQ VTLQVEGHPF ELMGDSVGLS 480
  481 QMWVNLVKNS LDALEACKDN RARQLRIEIY YHSSEIKVLV IDNGEGLQRQ ASELMASFAS 540
  541 TKDAGLGLGL AICKDVVSRH HGSIQIENCQ QSTHARLPWQ QGCVVTVVLP KG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle