YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117613343, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYICPLCAL PLTLTERTWG CPQAHKFDMA KEGYVNLLPV QKKNSKDPGD NQQMMLARRE  60
   61 FLTAGYYQSL SDRVNELALA YASEARQILD IGCGEGYYSH RLYNTLVAEH PCQLKGVDIS 120
  121 KSAIKYAAKR YPNLSFCVAS AYEMPIPSHS IDLAIRIYAP SKVEELQRVM APNGILITVS 180
  181 PGPLHHFALK QQIYAEPRLH PASDAKIAGF ECLYQERLRS QLELNNSQDI SHFLEMTPYA 240
  241 WKFTAEQKHT FAQSGLSCEL DFQIEVHRIS V

Type	Start	End	Confidence
Signal Peptide	1	20	0.73
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	271	0.99