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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78505566, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSNPLTHVR HINSPKRHSR HWAASLFTPS LLALSIGSLL CTSATAQTLN LSSPDKQIVL  60
   61 SLSDDTGRPE YQIHFHGKSI IEPSRLGLVF ASLGELGQGL RIKSSHSASA DEQWQQPWGE 120
  121 QEWIKDQHNQ LSVVLTDGKI DLNLEFKAFD DGIGFRYHLA AQHALPNNTP LAITDELTEF 180
  181 NIGQSDKATA WWIPSRGWNR YEYLYRTSAL NQVDRAHTPF TFKLVDGTHL SIHEAALVDF 240
  241 ASMTLDQQRD GKLKADLTPW SDGIRVKTQA GFYTPWRTIQ IADKATGLLN SHLILNLNEP 300
  301 NKLGDVSWVK PGKYVGIWWG MHLNENTWGS GPTHGATTSE TERYMDFAAK YQFDGVLVEG 360
  361 WNQGWDGDWF HNGDQFSFTK AYDDFDLPAI TAYGAKKGVR LIGHHETAGS VTHYRNQMDD 420
  421 AFALYEKHGV TQVKTGYVAD GGQIKRIDEN GITRHEWHDG QFMVGEYLHS VTEAAKHHIS 480
  481 INSHEPIKDT GLRRTYPNWL AREGARGQEY NAWGSPPNNP EHTAMLPFTR MLAGPMDFTP 540
  541 GIFDLAPKGL DAENRVQTTL MKQLALYVVL YSPIQMAADL PRNYQKHLDA FQFIRDVPTD 600
  601 WYQSIALAGE VGDYVVFARQ AKDQQDWYLG ALTDENTREV KVKLDFLDPN KRYQAQIYRD 660
  661 GAKADWKTNP YDYVIETKEV NAKDSLTLQL ASSGGTAIRF KAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle