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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78686675, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMESTTVRS FSDRRNLSRK PIALAIAASL IGVASLTGCS PSAPNADVST PTVAKSSDAN  60
   61 VQIAPGAPGK APTWAFSGKT GIGTSYEPYT HGQYQDSAQN PISRVWFSVA QGILTETMYG 120
  121 LIHNAQLKEL QFVITGNGFI DTEKDNTISS IEYLDTDANG RPQSLAYKII NRDVEGKYQI 180
  181 EKHIFTDPDR DTLMMRVTFT AFEAGITPHL YVNPHIDNAG ANDIGRIDHQ ALIARTADPH 240
  241 SSVMTVKSDI DFAQATTGFV GVSDGLADLA DNGKLDTLYQ ATSSAENPTQ GNIAFTASYP 300
  301 TLQANQPLNV NLAIGFGHDE TSSLANANAS LTAGDDAVLS QYNAGWHSYL QSLPAMPAMA 360
  361 QSTTDNGKLL YTSAMVLKAQ EDKTYAGALI ASLSNPWGDT VPAVTPSTGY KAVWPRDFYQ 420
  421 CAMAFLAMGD TQTPKVAFEY LKKVQVSDKT PGFNGTPGWF LQKTHVDGQI EWVGVQLDQT 480
  481 AMPIMFGWKL WQAGVLSQAE LSHWYQEMLK AAADFLVSGG EVNLDWNHTQ ITPPKTQQER 540
  541 WEEQAGYSPS TTAAVIAGLV AASDIAKAVN DSDASQRYLA TAKTLNQQLE KHLVTTQGLL 600
  601 TDSQGIKAPY YLRLSPNGEP NTAETLAANN GRAGLDQRQI LDGGFLELVR YGVRGATDKL 660
  661 INQSLALVDN TELEDNLRLK YSFTAKDGSS VPGFRRYGND GYGEDTLTGA NYAESGSNSD 720
  721 NQRGRVWPFF TGERGHFELA LASAKGELTG ANAQQTKQQL INTYVQGMET FANAGLMLPE 780
  781 QAWDGVGNAT RYQYQLGQGT NSATPLAWTH AEYIKLVRSM SDGRVWDNYP IVTEALK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle