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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78686641, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKPLTFCT LFAFIAAPVS TFGDDTELYV KESTTRTGAR PKVLVIFDNS GSMSTEEITQ  60
   61 VVDYDPSYDY PPVSGSGYSD SRIYYTVGGG ALPTPDTNSD RRNFSASING CNQSKAALDQ 120
  121 YGRFTGYIRE FTSSGTTGVW KELPETDGRN ITIVDCWEDI TKVDPNNSSS YNDGFPANGL 180
  181 TTGSGKKKKA YPYFISSYPS STWGDALAAA KNTDFGVGQP VTFYSDNYLR WYWLSKAGKL 240
  241 PTMKVARLDI AKKAISNIIS STPTVDFGLA VFNYNYPNEG NRDGGRIVSG ITQMTDAARD 300
  301 SLLLTIDKLP AKTNTPLCET MYEAYRYFAG QGVKYGHGDT DYGSYVGNRP PYDTSVEKGG 360
  361 AYSSPFKVCT DIAYVIYVTD GSPTVDKSAN NDVISLTSTG SKDGDYSSFS KNLDTPSYLP 420
  421 ALASYMFNND LINKLDSSNT EQMQNVRTYT IGFSKGAEDA APLLAETAKR GGGLYFAAQN 480
  481 SLELQNALND ALSNILNIDS SFTSPSIASN NFDRTQTFDA AYYAMFLPGK GPRWSGNLKK 540
  541 LKVTGDGTLV DSQGNAAIAD NGNIKDTACT IWSDCASQKD GNKVEVGGAS AQIKSQANRT 600
  601 ILSNLGGASS LSPLTLSNAQ NAAGGDQALA TFMRTSIDEV ANTLDWLKGI DVDDDNKNGS 660
  661 TTDKRNDVMG DPLHSKPLAL NFGSKTATDI RIILGTNQGV LHMFKDGGEA VSETWGFIPY 720
  721 ELLPNLFELR TNDPSGVHTV YGMDSSPVAY TETDSTGKVN KAWVFAGMRR GGSSYYALNV 780
  781 TNPDNPSLMW TINPSTDGFA DLGQTWSEPI VTKIVGYEKP VLIFGGGYDV SFDATPSSSP 840
  841 SGRAVYIVDA EKGILIHSFG GSASGATVLP DIQGSIPNSV AVLDSNNDGY TDRIYASDVT 900
  901 GNIWRMDLPS ASIDTWTAFK FASLGGTNSD NRRFFAEPVV AQTMFTNLSE VSVTTGGETV 960
  961 TTKTSQNVPY DAVAVGSGMR PSPSSTSVND MFFMLQDRNV VTKSFTGSNI PSAITINNLY1020
 1021 DVSSSAPTSE TDNISFSTKL GWFYDFSGVG EKSLTAALII DGKVYFTSYS PPADSVADNV1080
 1081 CVVSGSGKLY AFDLHKGTRT FSQLYYELGE RVPDTPQIVI PAPETGKDPY IYIIGVGKGD1140
 1141 KNENGEYSGT INVASGLGVN KIYYHIDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle