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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78505642, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTIAATAI LLALGLTACS DAPKTEAVPS SSSVEQAKSS QLTQAQLQQF GDTLGVSYRV  60
   61 LTNRPDDSCD KAAAEGRCFV AEIDFVPEVE LKSRDWAIYF SQMRPVQAVE SKEFSITHIK 120
  121 GDLYRIAPTE AFSGFSKGEK KTLKFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVQQ 180
  181 DPETGMEVRP YVEAYTDMVK QYRRTEADKL APATPAQLFS NNQQVSEDAS LAVNTIIPTP 240
  241 QKVAIHSQDK AVSLTSGIKL DFGSVTNASA AQQALDPEQL AAALSRLARL GVNESEQGLA 300
  301 VKLNWRQGAE GSYLLEIKAD AIEIAAADAA GFSYALSSLA SLIDVQDLRV NAMTIEDSPR 360
  361 YPFRGMHIDV ARNFHSKALI FDLLDQMAAY KLNKLHLHMA DDEGWRLEID GLPELTDIGS 420
  421 KRCHDLEENT CLLPQLGSGP FADVPVNGFY SKQDYIDIVK YADARQIQVI PSMDMPGHSR 480
  481 AAIKAMEARY RRLQAEDVEL QNTGKVQVVP VQETANQANT AVKALDAGAR QLQAEGKTTA 540
  541 AEQYLLSDAN DKTVYSSVQY YNDNTLNVCM ESTYQFVNKV IDEIAKLHQA AGQPLTRYHI 600
  601 GADETAGAWK QSPACLEFVA NNDKGVKSID DLGAYFIERI STMLAAKGIE AGGWSDGMSH 660
  661 VRPSNMPAKV QSNIWDVIAY KGYEHANQQV NNGWDVVLSN PEVLYFDFPY EADPKEHGYY 720
  721 WASRATNAHK VFSFMPDNLV ANAEQWTDIQ NLPFEADDRA RTDEKGKQSG PREQGKAFAG 780
  781 LQGQLWSETI RSDNTVEYMI FPRLLMLAER AWHQAAWEVP YQYQGALYNQ TTGHFTALMR 840
  841 EAQAQSWQQM ANTLGHKEFI KLDKVGIDYR VPTVGAEIRD GKLFANVAYP GLKIEWRQTS 900
  901 GQWQSYQAGQ SVTGSVEIRA IAADGKRKGR SLVVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle