YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117919766, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNLVYFLC VIALFLTSAA NAAPEVPSVS AISELAKALI NEKISVPANA KVEIAPQPID  60
   61 NRLLPAQCAS PIKVELASDR EISRNNTVKV SCDTPDLAYP WQIFMSVRVD ILFPVVVASE 120
  121 TLAPGELISP TQVEIRYIDQ NSLRGMQFSD TSQLSGVRVK RRVAKNFPIF ANNLCFVCKN 180
  181 DSVSIYVRSS NFVLKTVGEA LQDGNIGDQI RVKNSSSNKE LDAIVTAIGE VEVRM

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	235	0.99