YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78505796, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTAFTKISA IAVSLAGLIS APLSAFAQPI TAPAHKGSQA QALLFTKDNN AIIPAVDWLW  60
   61 VSERNGLMLQ SMPSADKTSL PAAKTLVKGE FELLAFSDPY ALTLDRRADR IRPIMIKQIE 120
  121 GKVATNVLPL LPMASFEINW ICIQPRPQDG NIYAWFGGED GYSEQWLLGD AGHFMPKKMR 180
  181 SQAIPVNSTS CAIDGDKLLV SEPESGVWQF DASPFADNSA KLVLAALNND IAGMQVIDGK 240
  241 LLLSDKKGVL TLDQQPIANY HLGKVQGLSG YRSGGNISNI KDNHTTLQLS LYDDKTDQYW 300
  301 FTEASLSAAS IEPNAKETQK EIVEIPAWVE SAPSDRPGDT MDDPAIWVHP TEPEKSLVLG 360
  361 TNKRWGLLSF NMHGEQVQAL PSGRINNVDL RQQVMLGGKK RDIAVATLRD NDSLAFYEID 420
  421 AHGKLSEYPN QATNMVDIYG MCLYQDANNL YVFANEKSGR IAQYRVDWQT NGPSIKLVRD 480
  481 IHTPSQVEGC VVDEAQHALF IGEEDKGIWR FNAKANGGTQ GELIIKAEGD LVPDVEGISL 540
  541 YQGANIHGKK QDLLVVSSQG DNSYLLYQAQ SPYAQLGKFR IGVNLNGMEN GRETSIDGSS 600
  601 ETDGLAVTHL SVGTGAWQQG MLVVQDGHNH LPDNNQSFKW LPWRNIIEEL SLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle