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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78506188, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKVLIGGLC ASLIAGLTAC NDKPAEVKAP ETAKTATAAA VTKALGSGIE FENFDKSVRP  60
   61 QDDFYEYVNG AWLKKAEIPA DRTSIGAFYD LREKSRDDVK AIIEEVAATP NLAVGTDEQK 120
  121 VADLYRSFMD TATLNKLGVT PLKGEFDAIN ALKDKNELVK YFAHSQIMGA GTPIAFYIDI 180
  181 DAKNSSRYAT HLWQYGLSLP EKDYYFNEAE RFVNIRKAYL AHIEKMFTLA GLADPKASAE 240
  241 SILALETAIA SKHWDVVETR DSTKTYNLYQ VKDLPSLAPD IDWTGYLTTL GADKQTDIIV 300
  301 NQPSYIQGLN EVLKTTDLAT WKTYMQWQVL THAASNLSEE LDNENFAFFS KTLNGQEEQE 360
  361 PRWKRGVAAV NGVLGEVVGK VYVKRHFAPE AKERMQALVE NLRGAYGDSI KDLTWMSDTT 420
  421 KQAAAEKLAK FNPKIGYPNK WEDYSKLTIK ADDLIGNAVR ASEVEHAKSL AKLGAPIDKD 480
  481 EWHMTPQTVN AYYNPTMNEI VFPAAILQPP FFNMEADDAV NYGGIGAVIG HEMGHGFDDQ 540
  541 GAKFDGEGNM RDWWTEKDLE EFSARGKALI AQYDGYYVFD DLHVNGSLTL GENIGDLSGV 600
  601 TIAYRAYKKS LNGKEAPVID GLTGDQRFFI GFTQIWRAKA KEEALRNRVA TDPHSPAEFR 660
  661 ALGALSNMPE FYTTYDVKPG DAMYIAPEKR VKIW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle