YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78686025, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYIKTNNYK YLRVFSAFGA LLASLALLTS QAAIAGSQSI MITVSKGFGL SLYASDLGDA  60
   61 KQIAMGSNGT LFVGSNKSGI VHALVDSNQD GRVDKRYVIA KGLESPDAIA FHNGDLFVAT 120
  121 ENRIVRFIDI EQRLRRPTRP KEIYSDLPES DKKSARAMNF GPDGRLYVSI GAPCNVCEAS 180
  181 APYSSIIAIN VDTGASEQIA LGVRDATGFD WSPQDGKLWF ADQGRDWMGD NLPPDEINRV 240
  241 DVIGSHYGFP YLHASSVVEP AYEKPKNLKI TVPVYELPAH VAPTGLAFYR GKQFPEIYHN 300
  301 QLFVAENGSW NRSSKVGYQI VMLKLENEQV VSRETVVSFL DGEFPVARPY ALLSGEDGAM 360
  361 YISDDLKGNL YRLFYKDGDN TEEPQELEEN E

Type	Start	End	Confidence
Signal Peptide	1	32	0.99
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	391	0.99