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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117919536, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPFLFKCQP HNRLVFSIAR ASSLISLNSR PQNVRHTLTS VISLILSSVI VSAASLFMAP  60
   61 THADDTELYV FEASARNGSR PQVLIIFDNS GSMSSLAYDV EAPYENKRAV NYAQSGNLFY 120
  121 SRGSSENAAA PNPNSRREKR KFKGALNGCE SSWEYLNRYG TFTGFFREYG FSGSSGSWRE 180
  181 FSELNGSSIS AVDCFEDIQE NKFGNAVGEA EGLPVDSLGT ASKPVRYTKA STSSSDSAKS 240
  241 AAKAKAEKTA FGTGKVVTVY TEDYLNWLHG PKTKVNKTRL ALAKDAIESV ILTTPGVDFG 300
  301 LAIFNMNGPY DGQRDGGRII SGIKPMSAAA KIDLLKGIND INYAQNTPLC ETLYEAYRYF 360
  361 GGQSQYFGDD DSDYHYYDQW GRYQGTYQAK RNPFTDPEAL VVGTNNYNSP FKRCQNEAYI 420
  421 IYITDGEPTL DNAADGLVEQ LTKGVGKHTS SPVSYLSALS GWMRNEDVNP NSAGKQTVRT 480
  481 FTIGFSEGAA SAEHLLKQTA ENGGGKYFDA TDASKLRSSL QTALNNILEK NASFTSPSVA 540
  541 SNNFNRTQTF DSAYYSMFLP NKGPRWLGNI KKFKVTSSGD VVDSKGNNAI GEDGNIKAEA 600
  601 CSYWTSAEEC GASGDGNDVK RGGVLGAMQQ ASSRTLYSNL GTGLSPFTLS NASRKAGGDA 660
  661 RLALYMGVDE TELSEHFDWA KGIDVDNDKN QDLSAASGAT PNWRADIMGD ALHSKPLALN 720
  721 FGSEDQPDIR IIVGTNHGFL HMFKDEGDSV SETWGFIPYE LLPNFRDLKA NAPTGVHSVY 780
  781 GIDGSPVAYT KMQGKRIEKA WVFVGMRRGG NAYYALDITS PDNPTFMWRI DASSPGMGEL 840
  841 GQSWSTPVVT TIPSATGDKP VLIFGAGYTP ATKDGAEIGS DDSQGRGVFI VDAETGALIH 900
  901 QFGGNGANTL LPGIANSIPS SVAVLDGNGD GRTDRIYATD TQGNVWRMDM PSANTSTWSG 960
  961 FKFAALGDRS SVAGDRRFFS GPAVAQTMVT NTFELTQVVN GKSTKTVTKQ NIPYDAVVVG1020
 1021 SGHRAKPSDA SRSDMFFALQ DRNIVTQSFQ GKPNQKPVPS ALTLSDLYDV TTAAPNDKAS1080
 1081 EIAFGQKRGW YYNFSRKGEK SLSSATIVQG EVYFTSFVPG SDASVNQCLS SGKGYLYKKN1140
 1141 LHKGTNGYRT DFLYAGELVL DTPQLVIPPA AQPDAPNAKA PTPDMFLIGI GKAVPEEATC1200
 1201 ESGNPKCIGS GPKANKIYYY VDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle