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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78506643, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKLNLITL ALLANTGFAV AADGYGLANA NTDKVKLSAW SCKGCVVETG VSGTVGVGVG  60
   61 YNGEEDIRSA NAFGSKNEVA GKFDADLAYR GEKGYRASVE AYQLGMDGGR LDVNAGKQGQ 120
  121 YNINLNYRQI ATYDSNSALS PYSGIGGNNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK 180
  181 RERAGLGFEY QGESLWSTYV NYMREEKTGL KQTSGSFFNQ SMMLAEPVDY TTDTIEAGVK 240
  241 LKGDRWFTAL SYNGSIFKNE YNQLNFDSAF NPTFGAQTSG AIALDPDNQS HTVSLMGQYN 300
  301 DGSNSLSGRI LTGQMSQDQS LVTSGYGYQL PTDAVDAKVD LLGMNLKVVS KVSNSLRLSG 360
  361 SYDYYDRDNN TPIEEWTQIS INNVSGKVAY NTPYDNRTQR FKVAADYRIT HGIKLDGGYD 420
  421 FKRDEREYQD RESTDENTVW ARLRVNSFDM WDMWVKGSYG NRDGSQYQAS EWTSSETNSL 480
  481 LRKYNLADRD RTQIEARITH TPLESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY 540
  541 MITADLLATA FYNHQTIESE QAGSSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRLG 600
  601 LDYTYSDSDS NTQVRQGITG DYGDYFAKVH NINFYAQYQA TEKLALRFDY KIENYKDNDA 660
  661 ANDIAVDGIW NVVGFGSNSH DYTAQMLMLS MSYKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle