YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78507678, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKKPLVIAI AIALTTTALS FTLAAEEGVT AQQKEKKPEL VETEFDEVLV SATRLSEKVS  60
   61 QTSRSVAVVS EEQLNVAQAS SVAEALKNEA NITLTNGPRA TSQGVEIRGL SGDRVLQTID 120
  121 GARQNTSSGH RGSYFMDPEL LKSIEVIRGP ASSLWGSGAI GGVVAQNTKS AQDFLAPNET 180
  181 FGGYLKQGYD TNGDRTKTSA AVYGQQDTID WLINGSYFDS NNINTGNDET LTNSASLGSS 240
  241 GLAKFGWQAD EASRLELSAR VNKINELVPS NPSAAVSSSV PLVRRKTDDQ NVTLNYSLAP 300
  301 ANNPYLDTKV QVYWNSTDYD EDRVTKGQFD STEYRTIGIN LNNSSQLGNT KLTYGVDGYR 360
  361 DTLKTVRDDR GQVGQRPGDI DGETTVWGAF TRADIQLTQT VNLDAALRYD SFKNESHNLN 420
  421 ASADDNELSP SLGLSWQTQP WLTLSARYDQ AFRAPTVEEM FSTGTHYCIP PIPGFLPQGL 480
  481 CNTFATNPNL KSEVARNKEL KADFRFNNLA GDDELAFTVN IFRNDVDDFI VQQVSNPLMG 540
  541 IPGFEQTTSW NNVEDAQLTG FELSGRYRIG QTRLAMNYGQ TRGEDRKTGD YIEGMPANKF 600
  601 NVDLSQGIME GDMKLGTRVT YVASQSNTPE GYRVAKYDDY TLWDVYLAWE PAMGAMSGLR 660
  661 VDFAIENIGD EKYQQAWQTL YQSGRNMKLS ARYMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle