YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117614023, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLVFIALM LLSMSACSLI PKPDLNITPA QVNPMSEVMK GLQNQPGPKF PIPVAVYSFR  60
   61 DQTGQYKPQA NVSSFSTAVT QGATSMLMQT LIDSKWFTPV EREGLQNLLT ERKISNKQNG 120
  121 TKGDDIPVLS TARLLLEGGI ISYETNTSTG GTGVEYYGIG ASEMYREDLV TIYLRAVDVH 180
  181 TGKVMMSVST SKRVLSQEMR AGLFRYTSLN RLAEAEVGFT TNEPVQFCVL QAIELAVAEL 240
  241 IDKGIKQGYW SQAQVRQPAE RQQELSQG

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	268	0.99