YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117614792, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIKALWCLS EFRLSNKKGL YIKAFAHYLK VNILVALAYF VVGKIGLLIA LPPGYSAAIW  60
   61 PAAGIAIASC IMWRQYAPWF GVLLGSWLIN INIGGALHLG WLPIAIASAS SLQAYVSAKV 120
  121 IRRIDPVFTL DKPNTVIKSC LSLALTCMIA TLFANAALVV HGTIPLKDAL GSTVNWWIGD 180
  181 LLGAVIFIPL TMLIFDQRSI WRSRRVQTGL PLLVGFLFCV GIYYYSDMNQ RQQLQDKFQI 240
  241 QSNAIISSVE SFQESNLQQV IALASLFDNS EQVSEDEFIQ FGKRNQLQLD GFRAWAWSPL 300
  301 IAASDKDSFE TETSTELGEP YKIRYLEGGA PNADGWLVPV KFVQPMNTSR AALGLDINGE 360
  361 PSRAAAIAKV RATLSPVMTG KIQLAEDPNG PGGTLFLAPV FDRLGNIVGF CSAVIDLQSI 420
  421 INEVEQVKGL HWRLTDMSAK GALLYANSQK TFPDFEGNIH SDKMGQYFQA NLMLADRHWH 480
  481 IVIYESYSSL MGDTFSLSLL MLLLAFITCA VVGGMTLVSS GERHRIAEKV AEKTMALSKE 540
  541 IARSQTFQAT LMESEQRYRT LFDKAPVGHA LKRLEDGQFV AINQAFMEIT GYTLEELQAI 600
  601 DPWELTPIRY QSSETEQLER LKQTRRYGPY QKHYRHKDGQ LVAVRLNGSL VTAANGEQLI 660
  661 LFIVEDITEQ ERTVARVNLL AQVFQQSGEG ITIMDANDII VDVNSAFTQI TGYSRDEIIG 720
  721 KNCRFLEAER TDRSIDAQVR AALEQTGFWQ GEVWDRHKEG FDFPKWLMMS IVRDETGAIS 780
  781 HYIGSFTDIS ERKVNEERIH FLAHHDSLTL LPNRLSLQSR LEKVFQEAFI SQTQIAVMFI 840
  841 DMDHFKNIND TLGHHVGDML LLEVARRLKN IMGNDDIVAR LGGDEFVVVL SDTDHDRVAK 900
  901 VAEALRSGLN QTYLIDNKPL HSSPSIGISL FPTDGDSVEA LMKNADMAMY RAKAAGRNNY 960
  961 QFFTAAMNTL VTERQQIETG LRQAIACNEL LLYYQPQVDI SSGQVVGVEA LIRWQHPELG1020
 1021 LVAPDRFIPI AEEIDMIIPI GQWVLENALA QLAEWRDKGA KGLRMAVNLS AHQLRKDTIV1080
 1081 ADIINVLTKH KLGKGALELE ITESVAMQYP EQNAKLLAEL RQHGIELAID DFGTGYSSLS1140
 1141 YLKLLPLDRL KLDRSFVKDI ESDPNDAAIS AATISMAHEL GLTVVAEGVE NEAQLVLLSG1200
 1201 MGCDLVQGYY FSKPLAADDC FRFIERNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle