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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78507799, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGLSARGR QPAHGPFRVI LIFSLLVLAI ATASRIGLGL WQGERVAAVD GWSHLLLQGI  60
   61 RVDIATLCWL WGVAALGTAL FSGDHLLGRI WQGVLRLWLT LGLWAIVFLE VSTPAFIEEY 120
  121 GIRPNRLYVE YLIYPKEVLS MLWAGRKLEL IFSVLLTLAT LWGGWTLSGK LTKNLRFPRW 180
  181 YWRPVLAVMV IVVTLLGARS TLGHRPINPA MVAFADDPLV NSLVINSAYS LVFAIKQMGS 240
  241 EEDASKVYGS LDRDEIINTI RQESGRPESA FTSSDIPSLS FNQASYNGKP KNLVILLQES 300
  301 LGARFVGSLG GMPLTPNIDA LSQEGWYFDN LYATGTRSVR GIEAVTTGFT PTPARAVVKL 360
  361 GKSQTGFFTL AELLKNHGYT TPFIYGGESH FDNMRSFFLG NGFSDIIDQK DYQSPAFVGS 420
  421 WGASDEDLMR KANSEFERLH SEGKSFFSLV FSSSNHDPFE FPDGRIELYE QPKQTRNNAA 480
  481 KYADYAIGEF FKLAKNADYW KDTVFIVVAD HDSRVGGADL VPVSRFRIPG LIIGDNVAPK 540
  541 RDHRVVSQID LPPTLLSLIG ISDSYPMLGR DLTQVSDDWP GRALMQYDKN FALMEGKDVV 600
  601 ILQPEKAAQG FQYDEKTEHL TPYAPAAQAL EKKALGWALW GSLAYQQELY RSGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle