YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117922416, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALFSLPIH NRAGICRHNF GLLGGVLIAL TPIALQAAPA SGEFVANKRC ELFQSKNKQT  60
   61 NPDNWQSNIG ERYPVAEILG NSSNPDWLRV RTNAASSPLR WIKGDCGQYN AAATAPAESI 120
  121 ATAQPAANVE PTQTSLTSKS TAVKSENSQE RGTPEKRQGN VCQIEDNYDS NVLALSWQST 180
  181 FCELYGSRKA ECRALSQTSD APQWQHFSLH GLWPNRQQCG TRYGFCSSVK QQPSDFCDYP 240
  241 EVPLNASVQK NLEEVMPSAR YGSCLERHEW WKHGTCRNQD PNDYFLLATQ LTQEVNASAW 300
  301 VQQFIHDRIG KKVTQQELNQ SFDASFGQGA HTKVTLDCAK GLLSEIRISL PQVINSSDSL 360
  361 PSLLAKAPKA KKTNCPATLL IDNPN

Type	Start	End	Confidence
Signal Peptide	1	37	0.89
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	385	0.99