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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78684296, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKDSFPDSF NFNSSKSFYA SVISSSWLML LAAVFFMGLS WYVLEEYLRD RGDERFNNNV  60
   61 QDLIGAVSSR MTAYEQVLRG GVGLFLASDG VSRREWQLYV SNARLSEYYP GIQGLGFAQL 120
  121 LTPATVEAFT QEVQEEGFDD YRVTPVGDRD LYCAIKYLEP FDWRNQRAFG FDMCSESTRR 180
  181 AAILHAIATG LPTASGKVTL VQETPDDAQA GILMYVPLYR GQPMTEEERK QQAIGVVYAP 240
  241 FRMNDLMQGI MGKRFSGLKL AIYDGMEANN ESLMFSSHKA LPSTNDVFYQ SQLETMEGQV 300
  301 WRLEVSSESR FISSAEQTQS VWLQVIGSAF ILALFYSVLT MARNRYQESR LTAELIANEK 360
  361 RFRLVIEASP SALFMVDRKG IITLVNTHAE RLFGYARDEL LGRSINMLLP EGLREIHQQH 420
  421 MGSYLAQPIA KNMSLRDDLF GCCKDGTRLA IEVGLTPIHF SNGVSILATI NNVSERKRIE 480
  481 AQRIEHTAEL ERINKELDQF AYIASHDLKS PLRGIEQLTS WLSEDLSENM DENVQKYLGL 540
  541 IQSRIQRMVL LLDGLLMFSR IGRVDAEIVD VDSRQLIEDM FALVAPPQGF SLELEGNFPQ 600
  601 FKTVKTLLEL VIRNLFSNAI KHHDQAEGVI KVVCSASNTH YWFSVIDDGP GISTKYHGKV 660
  661 FEMFQTLRPR DEVEGSGLGL SLVKKTVESL GGKIQLESEG RGCCFRFSWP MRIVNKEGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle