YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78684226, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRINPRLFSI STSVKASSKA KQQGFTLIEL VVGMLVIAIA IVMLSSMLFP QADRAAKTLH  60
   61 RVKSAELAHS VMNEIWGKRY DQNTNANGGV PACGSPLGAP CSRVTNLGPS EWKWPDEGEG 120
  121 RNDFNDVDDY HGLTQNATML NSSQTYVEAY PNYQLSVSVA YGSAPNTKLV TINVTTPDNE 180
  181 VITYNLVRSN Y

Type	Start	End	Confidence
Cytoplasmic	1	24	0.71
Transmembrane Helix	25	44	0.85
Non-Cytoplasmic	45	191	0.82