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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117922083, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFRLILSL LIIVCSSPLA KADWSKTFIE GVNNYDRNGS ITFNSSYLYN APNNALIWYS  60
   61 YLPTYNFIQK GNSLATLCVT SNNSYRWCQD GDYIASLPSN RIDFSQCTSS GTVNIGPPTW 120
  121 DNKQINVIEG EYNNIVLDGG SDKTIRFVSN NGVYKMKSLK ATSGRIELAA GQYWIETLSI 180
  181 NDGVTLVFPS TGTVSFFIKN NYRHYNLNTI GQAEKFLIYS YSNFTLNGEA SLKSYVVAEG 240
  241 NAVLDGSSYL EGAITARNIS LGGNSSIKFD DNAAKIDVVP NCNPAPVLQC FNDNFSLSAL 300
  301 SNDWVVSRSS GTFTPAIVSG RMRLTEAKSN QSTASTYQRL FPAANNLVEI QFDHYAYGGN 360
  361 GADGIALVLS DAAITPQPGA FGGPLGYGYK PGISGFAGGW LGIGIDEFGN FSGEGGRVNL 420
  421 SGQRRQSVVV RGSGAGTSGY NYLRGTCNDG KSNTSGNCLS PTVDGNNVSP AHRYKITIDS 480
  481 QVSGKSIVKV ERNTGSGFVT LIPAFDAIDE QGQAAIPTDF LLSLTGSTGG SNNNHEIDNV 540
  541 QICALKSNPI GAQIDHFEFD HTGQGLTCNP ETVTIRACAN ASCSQLFTDP LAATLLPESA 600
  601 SEGIWIGGKQ VSFSNGSTQL QLRRNTPGVV TLGVKGSSPT TKPLSKTLCR IGNGGMSENN 660
  661 CSLTFADSGF VFDVPDKLAN KPVEVLVKAV KKSDVTKQCV PSFQDQTKIL NFWSQYVEPS 720
  721 APITPKAVTV NNTAISTASA TPTVLSLGFD VNGQAKVSVN YPDAGKLQLD AQYIGSGNEQ 780
  781 GLVMTGSDQF VSVPAGLCVK PVDASASCSS ADMSCNAYRK AGQNFGMTVQ AMAWEKDGDT 840
  841 DFCSGNVSTP NFSDQAMTLT SKVVAPNMAS GGHDGALGVA SYSHTIQANN LNSITNQTIS 900
  901 EVGVFQIAAQ ASPNYLGAAS SLNIPIGYSA NIGRFVPDRF LVGDISVLPA CGSFSYMDQP 960
  961 FPMSMSLTAL NIGGAVTQNY FPPFSLATAK LVGENNNNGI DLQSRLSALP VNAASWVQGV1020
 1021 ATVDGAYRAN LSRVTPNVAT NLYQDGPFEL LDIGVQLMDN DPRPNGLFSY VASPDMDAAT1080
 1081 TGNCTNCNAK KITTQILRHG RVVMDNTYGP ETEILRMPTR AEYSNGANWV LNGDDSCTIA1140
 1141 TYGLASQVDN AALGYNFDPD LTTGQSINRS GASSAFQAGQ FDLLWRALTS SGNLYRGQVT1200
 1201 APLDVPTWLE WYWNWNGVSP TSLSDPRASA FFGRYRGHDR IIYWREVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle