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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78495751, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPPARRCRC SMHSMRSRTH DDADAWPCGR RRRGRIRSRH RRTAHDAGRS DGAGDDARAR  60
   61 RLRPQAQRRR RGVRRQRAGA VRADDALRVS RAQSAHHRRH PDRRLLVHVA SGACGGGDRA 120
  121 RAVRSGADRL WQHAALGVAR RRVADRYQSL RGAVSAGDAG ERLRAGRRPT HVSVRHHARA 180
  181 ARRRRGRGAA MGAAQSEGLG ERTAQPRAGA GRADAVGPAH RARLLPGARR RRRHDRDFGG 240
  241 DRARLPQTAD PCARHRRSHR PRLDLRHGRP HHHGRRGLRA ARLCGGGLSA GRHRRRAAIR 300
  301 RLHHHADPVS RGSRLLRQGR GRFFRAGRWH RAGRSPRRQH QWRRAVLLPS RHVRPVGDDR 360
  361 MRPAAARRMR RQAARQAQRR TGARQWRGAV QPMHRDLRHT GGAVAPAAFK TTTNKQYQQK 420
  421 GADMETIKQP GATDAPASEA AGHVYRKITL RLIPFLFACY VLNYIDRVNI SFASLQFRQD 480
  481 LGISAAAYGF GVGIFFVGYI LFEIPSNLLM QRIGARRTMM RIMVLWGLVS ISTMFVTSAT 540
  541 QFYVVRALLG IAEAGFFPGV VFYLTLWFPS AMRGRIMAMF VLAIAVSGVI GGPVSGLIMS 600
  601 QMADFAGLKG WQWLFLIEGI PPVLVGIMAY FYLDDGPEHA KWLNAEEKRF VIGNLAIEAA 660
  661 SRESSKHGTF WTAVRDPRLY AAAIAWFTVA WCGSVINYFS PTIIRNSGVS DTLMVGLLSA 720
  721 IPYAVGALGM VLINRHSDLK LERRWHYACS VFLAAAAIAL LPSVAQNWKL AIALLAVLSV 780
  781 GYLGSVALFW SIPTAYLSKK ASAGSIALIS SIGQCGGLTA PNIIGWTQQA TGDFALGFYI 840
  841 IAVGMVTGTV IMLLGLPARL LHERYIGHAP AERSPGASHV GHFPPAGPAK PSTEAAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle