YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90107771, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIATPPFKRL ALIGFGLIGG SIARGARAQG LAAEIVATAR SAQTRARVAE LGIVDMVLES  60
   61 NAEAVQGADL VILCIPVGAC GEVAKEIGPH LSPGAIVSDV GSVKAAVVRA MAEHLPEGVH 120
  121 FIPAHPVAGT ENSGPDSGFA ELFINRWCIL TPPEGADPKA VDKLAAFWSG LGANVEVMAA 180
  181 EHHDLVLAVT SHLPHLIAYT IVGTAEELEG VTRSEVLKFS AGGFRDFTRI AASDPTMWRD 240
  241 VFLNNKDAVL EMLGEFQEDL SKLTRAIRRG DGDALYEHFA RTRTIRRGIV DIGQDEALPD 300
  301 FGRPKAALAK KAAE

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	314	0.99