YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78494088, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQIERVHGA LDARGERAKS LQTVYVYEAP VRLWHWVNAL LIVTLCITGY LIGSPLPSVS  60
   61 GEASASFQMG YIRFVHFAAG QSLIVFFLLR LYWAFVGNRN SRQIFYLPLH NRTWWWGIFY 120
  121 ELKWYFFMVK DPKKYIGHNP LAHVAMFSFM VFLLFMMASG MALYSEGQGI DSWQYKLFGF 180
  181 MFAIFPNSQD LHTWHHLGMW AIVVFVVVHI YAAVREDILS RQSMISSMIS GERLFRDDID 240
  241 DFPR

Type	Start	End	Confidence
Cytoplasmic	1	33	0.86
Transmembrane Helix	34	54	0.91
Non-Cytoplasmic	55	73	0.76
Transmembrane Helix	74	94	0.94
Cytoplasmic	95	140	0.81
Transmembrane Helix	141	164	0.88
Non-Cytoplasmic	165	191	0.87
Transmembrane Helix	192	214	0.89
Cytoplasmic	215	244	0.96