YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78494031, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLDLLRVLL FPALMAFAAA SDLFTMTISN RVSLLLIVGF LALAGLGGMG LQEILSHIAA  60
   61 GGSVLAIAFA CFAFGWVGGG DAKVASAAAL WFGFDHLLEY LVYASLFGGA LTLLLLQFRQ 120
  121 WPLPYALCGQ PWLLRLHAKE TGIPYGIALA TGALMIYPET EWIRAVDLAH FAIY

Type	Start	End	Confidence
Cytoplasmic	1	7	0.67
Transmembrane Helix	8	26	0.89
Non-Cytoplasmic	27	31	0.64
Transmembrane Helix	32	51	0.91
Cytoplasmic	52	57	0.63
Transmembrane Helix	58	79	0.91
Non-Cytoplasmic	80	96	0.74
Transmembrane Helix	97	118	0.88
Cytoplasmic	119	140	0.72
Transmembrane Helix	141	158	0.71
Non-Cytoplasmic	159	174	0.58