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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78389830, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWRGQTTLA NSSPAELTEP LPHEFPAPNP ASGQRPGGRY AVRRGGDEFR ADLQSHAGRQ  60
   61 LRAGRIAADR RLGVLDAADQ IPGAVLSRHA DHAGLHVLLR HRGADRGAAA DDRRADHLGD 120
  121 HGDDRAVDRV PGRAEMDFWR QPAAVSAGVR EPVGVVRRTA DPDRLCHEPG GLGGDDDRHG 180
  181 VVLQGLQIWS SDARHRVQPA GRAVARHLGE KRVRDGLGDL GHRLGGRRRR GGGGQRRVVG 240
  241 ALHLRHQGVS RGDSRRAGFD RRRRGRRPDH RAPRERRPIC RQRISALGQS LRGGAVLRAD 300
  301 HHPDDQALWA VRHQRHRTDL IPMATPSIIP AGDFRSSYAA DTTIFPTPMS RNAALAGIVV 360
  361 VCFAPLLLSE YWLSILIQIG IYGIAALGLN ILVGFTGQIS IGHAAFFLLG AFTSAYISNT 420
  421 LPIPVFFAIP LSGVITALVG LIFGLPAARL KGLYLVIATL AAQYILLDFF SRAEWFSGGS 480
  481 VPAMAQPFSL FGYVLRGDRQ YFYVVLAYVL ASYLLVTNLM RSRDGRALVA VRDHYLSAEI 540
  541 MGINLTKYRT LSFGLAAFFA GIAGALYAHY QLVVSNEGFG IERSIIFLAM VIIGGTGSIM 600
  601 GTLMGTAFVV LLPESMEWLS ASLKGGAIDR ALSLNNNLTF LREIAIGVII ILFLIFEPDG 660
  661 LAHRWRQIKT YWKLYPFSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle