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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90426214, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNANLRNFAL WVIIVLLLLA LFTLFQNPGQ RVASQDISFS QLLSEVDQNK VRDVVIQGPE  60
   61 IHGTFTNGSS FQTYAPNDPT LVSRLYNGKV SITAKPPGDN VPWFVSLLVS WLPFIALIGV 120
  121 WIFLSRQMQG GAGKAMGFGK SRAKMLTEAH GRVTFEDVAG VDEAKQDLQE IVEFLRDPGK 180
  181 YQRLGGRIPR GVLLVGPPGT GKTLIARAVA GEANVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FEQAKKNAPC IIFIDEIDAV GRHRGAGLGG GNDEREQTLN QLLVEMDGFE ANEGVILIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVPNPDVVG REQILKVHVR KVPLAPDINL KVIARGTPGF 360
  361 SGADLMNLVN EAALTAARRN KRMVTQAEFE EAKDKVMMGA ERKSLVMTEE EKMLTAYHEG 420
  421 GHAIVGLNVI ATDPIHKATI IPRGRALGMV MQLPERDKLS MSLEQMTSRL AIMMGGRVAE 480
  481 ELIFGRNKVT SGASSDIEQA TRLARMMVTR WGLSEELGTV SYGENQDEVF LGMSVSRTQN 540
  541 ASEATVQKID AEIKRLVEEG YNEATKILTE KRADLEALAK GLLEFETLSG DEIQDLLNGK 600
  601 KPNRESVLEP AGPRTSAVPP AGKPRPRPDA GLEPQPQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle