YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78358875, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKQLVGAV SLTAASVFSA ASMAALDPSL PTYEKTSGVS GNLSSVGSDT LANMMTLWAE  60
   61 EYKEMYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEIEAFEKH YGYQPTAIRV 120
  121 AIDALAVFVH KDNPIKGLSI QQIDRIFSAT HKCGGSDVQR WDHVCLDGSW AAKDVQLYGP 180
  181 NSVSGTYGYF KKKALCKGDF QANVNEHPAS ASVVQSVSQS LNAIGYSGIG YKTAGVKAVA 240
  241 IAKKGTNYIE ASAANAADGS YPLSRYLYVY VNKHPNKELA PLEREFLRFV LSKQGQQIVM 300
  301 KDGYVPLPRS VTAKDLEKAG IRL

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	323	0.99