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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126638164, gi...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKPSIFKR IFSTLWKVVN TTRKVILNLF FFGFIALLFV ILAGEESPTV EEGSALVLDL  60
   61 SGNVVEQKRQ VDPIEAAMKS GKGGQSDGEI LLADLLNAID NAASDKRISA LVLDIGHLRW 120
  121 TGISKLQSIG DALTRFKASG KPIIAMGNWY GQNQYFLASF ADTIYLNPQG SVEIEGLSRY 180
  181 RQYFKSALDK LKIKAHVFRV GTFKSAVEPF MRDDMSEAAK SANRELLQDI WDSFEATVSE 240
  241 NRGIKQDDLM LSAERYLTEL NKANGRSSEM AINLGWVDKL ASAEQFRLDM VERVGEAKEG 300
  301 HSFKQISFYD YQSVIQQFPP VLMHDAVGII VAKGNILNGH QAAGQIGGES TSALLRKARF 360
  361 DDKVKAVVLR VDSPGGSAFA SEQIRQEVLA LKAANKPVVV SMGTYAASGG YWISASADYI 420
  421 YATPTTLTGS IGIFGMMTTF EDSLAELGIH TDGVSTSGWT AFSSTQGISD ELKEIIQRHI 480
  481 ERGYQDFISL VSEERGMKPE EVDKIAQGRV WSGKRALELG LVDELGDLEQ AVTKAAELAK 540
  541 LEKFDTKLIE QELSPQEQFI QQMFAQAVSY MPQSLSQSSL IEQLLGEVSS VVEEFNAFDD 600
  601 PNGIYLYCDS CNY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle