YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78359194, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRKRMAMH DHAAEASLFK RRAIFTFACV VVLLSILLGN LYHLQVLSYK DYETRSNDNR  60
   61 IRVVPVAPSR GLIYDRHGQL LAENQPFYSL ELIPEKVKDV PATLDELAKV VELSKDDRES 120
  121 LVASLKYHRR FKPITVKNRL SEEEVAIFSV NQHRFPGFSI DAGLKRHYPY DGLLTHVLGY 180
  181 VGRINNRDQA ALQRNGQWQN YAATKDIGKQ GIEKFYESLL HGMPGHLEEE VNNRGRTIRT 240
  241 LKSVAPEPGQ DIYLTLDLQL QKKAMELLAG RRGSIVAIDP RDGGILAMVS SPSYDPNQFV 300
  301 HGISSKAYSD LLNARSRPLI NRATQGQYAP ASTVKPHMAL LGLEEKVVTP KTRVWDPGFW 360
  361 QIPGVERKYR DWKRWGHGWV DVNGALVHSC DTYFYDMAYK TGIDKISNFM QQFGFGERTG 420
  421 VDIFEESAGN MPSKDWKRLK YNQPWYIGDT ISVGIGQGYW TTTPLQLANA TAIMANKGER 480
  481 FVPHLLKSIK NDTVKVDTPV DKMAPVVLKS PHNWQIINEA MRDTAHKSRF VDAGYTAAMK 540
  541 TGTAQVFSVA EDEKYDAENI DEHLRDNALI VAYAPYEAPR IVLAVVLENA GWGGANAGPV 600
  601 ARALLDEYML RDNLPLETAG SPHNERP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle